| Team | Squad | Seed | Note | |
|---|---|---|---|---|
| 1 | Virginia State | A | 3:12.00 | |
| 2 | Queens (N.C.) | A | 3:19.10 | South Atlantic Conference Champiionship |
| 3 | Washington and Lee | A | 3:19.76 | W&L Track & Field Carnival |
| 4 | Coker | A | 3:21.00 | |
| 5 | Virginia State | B | 3:25.00 | |
| 6 | Belmont Abbey | A | 3:25.00 | |
| 7 | UNAT | A | 3:25.00 | |
| 8 | High Point | A | 3:26.00 | |
| 9 | Pfeiffer | A | 3:27.30 | ECAC DIII Indoor Track & Field Championship |
| 10 | St. Andrews | A | 3:32.50 | |
| 11 | UNAT | B | 3:33.00 | |
| 12 | UNAT | C | 3:34.00 | |
| 13 | Catawba | A | 3:36.97 | South Atlantic Indoor T&F Championships |